Development and application of multiplex PCR panels of microsatellites in Chinese mitten crab (Eriocheir sinensis)
DOI:
CSTR:
Author:
Affiliation:

1. Key Laboratory of Freshwater Aquaculture Genetic Resources, Ministry of Agriculture;Shanghai Ocean University, Shanghai 201306, China;
2. Zhejiang Aoling Aquatic Seed Industry Technology Co., Changxing 313106, China;
3. Collaborative Innovation Center of Aquatic Animal Breeding Center Certified by the Shanghai Municipal Education Commission;Shanghai Ocean University, Shanghai 201306, China

Clc Number:

S917

Fund Project:

  • Article
  • |
  • Figures
  • |
  • Metrics
  • |
  • Reference
  • |
  • Related
  • |
  • Cited by
  • |
  • Materials
  • |
  • Comments
    Abstract:

    In order to increase the analysis efficiency of microsatellites in Chinese mitten crab (), we report four highly informative, multiplex PCR panels developed from 16 microsatellite markers. The multiplex PCR panels were used to evaluate the genetic diversities and parentage assignment for 95 individuals in 3 families. The results showed that the 16 microsatellite markers screened in this study were rich in polymorphism, for example the average of observed heterozygosity (e) was 0.8164, and the average of polymorphism information content (PIC) was 0.7927. Cervus 3.0 software was used to determine parentage assignment for 95 individuals in 3 families, and the results revealed that the accuracy of parentage assignment using any 2 groups of multiplex PCR panels was more than 94.74%. When using any 3 groups of multiplex PCR panels, the accuracy of parentage assignment was greater than 98.95%. The accuracy of parentage assignment was greater than 100% using all four multiplex assays. Using the combination of set 1, set 2, and set 3, or the combination of set 1, set 3, and set 4, the accuracy of parentage assignment also reached 100%, so the selection of these combinations of multiplex PCR panels can not only get accurate genealogy information, but also reduce workload and costs. Therefore, these multiplex PCR panels can provide a convenient and efficient way for breeding and family management of .

    Reference
    Related
    Cited by
Get Citation

肖起珍,刘青,李清清,郑海地,吴旭干,成永旭. 中华绒螯蟹微卫星多重PCR体系的建立及其亲子鉴定应用[J]. Jounal of Fishery Sciences of China, 2018,[volume_no](2):325-335

Copy
Share
Article Metrics
  • Abstract:
  • PDF:
  • HTML:
  • Cited by:
History
  • Received:
  • Revised:
  • Adopted:
  • Online: April 24,2018
  • Published:
Article QR Code