紫贻贝产卵前后转录组分析与相关基因的筛选
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姚荣辉(1997-),女,硕士研究生,研究方向为海洋生物学.E-mail:1593017932@qq.com

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S917

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国家自然科学基金面上项目(42076119); 浙江省“三农九方”科技协作计划“揭榜挂帅”项目(2023SNJF065)


Transcriptome analysis and screening of related genes before and after spawning of Mytilus galloprovincialis
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    摘要:

    为探究紫贻贝(Mytilus galloprovincialis)雌性生殖相关基因在产卵过程中发挥的功能及其参与产卵活动的调控机制, 对紫贻贝产卵前后的性腺组织进行了转录组测序分析。结果显示, 紫贻贝产卵前后存在的差异表达基因为 4060 个, 其中上调的基因数目为 1488 个, 下调的基因数目为 2572 个。GO 富集分析显示, 这些差异基因主要参与生长、发育过程、生殖、生殖过程等生殖相关的生物学途径。KEGG 富集分析显示, 与产卵、生殖相关的信号通路包括 TCA 循环、GnRH 信号通路、卵巢类固醇生成、雌激素信号通路、催产素信号通路、类固醇生物合成等能够被显著富集。荧光定量分析结果显示, 促黄体生成激素 β (LHβ)和基质金属蛋白酶 14 (MMP14)基因表达水平显著升高, 促性腺激素释放激素受体(GnRHR)、细胞色素 P4503A 酶(CYP3A)、细胞色素 P45017A 酶(CYP17A)基因表达水平显著下降。本研究利用转录组学分析了紫贻贝在产卵前后性腺组织转录水平的差异, 揭示了紫贻贝性腺组织中参与调节产卵过程的主要途径和候选基因, 为进一步阐明紫贻贝产卵活动的内在调控机制提供数据支撑, 也为紫贻贝苗种繁育提供理论支持。

    Abstract:

    The aim of this study was to identify functional genes associated with the oviposition of Mytilus galloprovincialis and to elucidate the underlying mechanisms of oviposition. Transcriptomic analysis of female Mytilus galloprovincialis gonads was conducted before and after spawning. Pairwise comparisons of sequencing libraries from tissue samples were also performed. Before and after spawning, there were 4060 differential genes, with 1488 up-regulated and 2572 down-regulated genes. The GO functional enrichment terms are grouped into three functional categories: biological process, cellular component, and molecular function. Some genes were annotated by GO terms such as growth, developmental process, reproduction, and reproductive process. KEGG enrichment analysis revealed signaling pathways associated with oviposition and reproduction, including the TCA cycle, GnRH signaling pathway, ovarian steroidogenesis, estrogen signaling pathway, oxytocin signaling pathway, and steroid biosynthesis. In conjunction with GO and KEGG enrichment results, we identified five potential genes associated with reproduction: gonadotropin-releasing hormone receptor (GnRHR), luteinizing hormone β (LHβ), matrix metalloproteinase 14 (MMP14), cytochrome P4503A enzyme (CYP3A), and cytochrome P45017A enzyme (CYP17A). The expression levels of LHβ and MMP14 genes increased, whereas the expression levels of GnRHR, CYP3A, and CYP17A genes decreased. These findings were validated using real-time quantitative PCR (RT-qPCR). The differential expression of the five genes mentioned above is crucial in regulating the synthesis of sex hormones and reproductive process during the spawning of Mytilus galloprovincialis, which is consistent with the results of transcriptome sequencing. In this study, we utilized transcriptome sequencing technology to analyze the differences in the gonad transcriptome of female Mytilus galloprovincialis before and after spawning. The aim was to identify the key pathways and candidate genes involved in spawning, which could provide valuable data for the breeding of Mytilus galloprovincialis.

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姚荣辉,叶莹莹,马颜雯,董震宇,郭锋,王伟峰,郭宝英.紫贻贝产卵前后转录组分析与相关基因的筛选[J].中国水产科学,2023,30(8):953-964
YAO Ronghui, YE Yingying, MA Yanwen, DONG Zhenyu, GUO Feng, WANG Weifeng, GUO Baoying. Transcriptome analysis and screening of related genes before and after spawning of Mytilus galloprovincialis[J]. Journal of Fishery Sciences of China,2023,30(8):953-964

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  • 收稿日期:2023-06-01
  • 最后修改日期:2023-07-20
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  • 在线发布日期: 2023-12-28
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