蛙虹彩病毒巢式 PCR检测方法的建立
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中国检验检疫科学研究院 动植物检疫研究所, 北京 100029

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张旻(1979–), 男, 助理研究员, 博士, 水生生物学专业. E-mail: zhmbiohunter@hotmail.com

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国家质量监督检验检疫总局科技项目(2008IK010); 中国检验检疫科学研究院(CAIQ)基础科研业务经费项目(2008JK004).


Development of a nested PCR detection method for Ranavirus
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The Institute of Animal and Plant Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100029

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    摘要:

    (Soft-shelled Turtle Iridovirus, STIV)基因保守区设计内引物和外引物(Epizootic Haematopoietic Necrosis Virus, EHNV)的巢式检测方法拷贝的病毒粒子。而且与传染性造血器官坏死病毒、鲤春病毒、病毒性出血性败血症病毒、斑点叉尾病毒、传染性胰脏坏死病毒、真鲷虹彩病毒、牙鲆弹状病毒以及锦鲤疱疹病毒等其他非蛙虹彩病毒无交叉反应。该体系具有简便、快速、敏感、特异性高、低成本等特点

    Abstract:

    In this study, a nested PCR for detecting soft-shelled turtle iridovirus (STIV), wo pairs of primers were designed based on the sequence of major capsid proteins (MCP) gene of STIV by The outer primers were P1 (5′-′CGCGATAGGCTACTAT AACATGG). The first round PCR was carried out using PCR Supermix with 40 ng template DNA, 0.6 µL primers (P1/P2, 50 pmol/µL), 2 µL PCR buffer with MgCl2, 0.5 µL Tag, and dH2O was added to reach total volum of 20 µL. The conditions of PCR were: 94 PCR was carried out by using the same supermix except 0.5 µL template DNA, the product of first round PCR, 0.6 µL primers (P3/P4, 50 pmol/µL). The conditions were the same with the first round PCR. In this study, a standard recombinant plasmid was produced to in PCR assay. The DNA products of first round PCR were extracted, and then cloned into pGem-T Easy vector. After sequencing, the -S were used in ranavirus detection as the position control. Specificity and sensitivity of the PCR method were estimated. Data showed that the detection limit of this assay was 102 copies for standard recombinant plasmidIt was also found that the specificity of this assay was high without any cross-reactions with DNA from Infectious haematopoietic necrosis (IHNV), Spring viraemia of carp virus (SVCV), Viral Haemorrhagic Septicaemia virus (VHSV), Channel catfish virus (CCV), Infectious pancreatic necrosis (IPNV), Red sea bream iridovirus (RSIV), Hirame rhabdovirus (HRV), Koi Herpesvirus (KHV) and Infectious spleen and kidney necrosis virus (ISKNV) provided bySTIV, EHNV and TFV DNA could result in the same pattern of curves with the two primers. confirmed that the PCR assay is a powerful tool for the detection of ranavirus with high sensitivity and specificity. Moreover, the is of low cost and time saving in contrast to ELISA assay, . So the Nest-PCR method could be used to detect these three kinds of ranavirus efficiently.

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张旻,林祥梅,江育林.蛙虹彩病毒巢式 PCR检测方法的建立[J].中国水产科学,2011,18(3):661-666
ZHANG Min, LIN Xiangmei, JIANG Yuin. Development of a nested PCR detection method for Ranavirus[J]. Journal of Fishery Sciences of China,2011,18(3):661-666

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  • 在线发布日期: 2011-05-09
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