应用SSR和SRAP标记构建青虾遗传连锁图谱
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1. 南京农业大学 渔业学院, 江苏 无锡 214081;2. 中国水产科学研究院 淡水渔业研究中心, 淡水渔业和种质资源利用重点实验室,江苏 无锡 214081

作者简介:

乔慧(1981), 女, 博士, 主要从事水产动物遗传育种研究. E-mail: qh1212000@126.com

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江苏省高技术研究项目(BG2007328); 中央级公益性科研院所基本科研业务费专项资金资助项目(2011JBFA02).


Construction of a genetic linkage map for oriental river prawn (Macrobrachium nipponense) using SSR and SRAP markers
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1. College of Fisheries, Nanjing Agriculture University, Wuxi 214081, China;2. Key Laboratory of Freshwater Fisheries and Germplasm Resources Utilization, Ministry of Agriculture, Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences,

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    摘要:

    Macrobrachium nipponense分布在其中不少于定位、基因克隆、遗传选育等提供指导

    Abstract:

    , is widely distributed throughout China, Japan, Korea, and Burma. This species is of economic importance in China where about 209 000 t are produced annually by intensive culture. However, the economic value of the species has declined significantly in recent years due to genetic retrogression. To facilitate genetic improvements, we constructed a genetic linkage map for oriental river prawn using SRAP and SSR markers and pseudo-testcross mapping.A total of 175 makers including 27 microsatellite and 148 SRAP makers were mapped in 53 linkage groups. The number of markers per group ranged from 2 to 8 and thirty-five groups included no less than three markers. The average number of markers per group was 3.3. The length of groups ranged from 6.7 cM to 91.2 cM (Kosambi). The maximum space between adjacent markers was 49.0 cM while the minimum space was 1.4 cM, with an average distance between markers of 13.1 cM. The framework map contained 16 groups with a length of 997.2 cM. The total length of the map was 2 270.5 cM. The average estimated genome size for oriental river prawn was 4 380.6 cM. Based on the estimated genome lengths, the map accounted for 51.83% of the genome. This is the first genetic linkage map of oriental river prawn. Our data may be used to aid quantitative trait loci (QTL) mapping, gene cloning, and genetic selection. The map also provides a basis for the construction of a higher density genetic linkage map for oriental river prawn.

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乔慧,吴滟,傅洪拓,龚永生,蒋速飞,熊贻伟.应用SSR和SRAP标记构建青虾遗传连锁图谱[J].中国水产科学,2012,19(2):202-210
QIAO Hui, WU Yan, FU Hongtuo, GONG Yongsheng, JIANG Sufei, XIONG Yiwei. Construction of a genetic linkage map for oriental river prawn (Macrobrachium nipponense) using SSR and SRAP markers[J]. Journal of Fishery Sciences of China,2012,19(2):202-210

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  • 在线发布日期: 2012-03-19
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