脊尾白虾血细胞全长cDNA文库的构建及EST序列分析
DOI:
CSTR:
作者:
作者单位:

1. 上海海洋大学 水产与生命学院, 上海 201306; 2. 中国水产科学研究院 黄海水产研究所, 山东 青岛 266071

作者简介:

段亚飞(1989), 男, 硕士研究生, 主要从事海水养殖生物种质资源与遗传育种研究. E-mail: dxfei87@126.com

通讯作者:

中图分类号:

Q959

基金项目:

国家863计划资助项目(2012AA10A409); 国家虾产业技术体系项目(CARS-47); 公益性行业(农业)科研专项(201103034); 中央级公益性科研院所基本科研业务费资助项目(20603022012021).


Construction of a cDNA library from the haemocytes of Exopalaemon carinicauda and analysis of partial expressed sequence tags
Author:
Affiliation:

1. College of Fisheries and Life Science, Shanghai Ocean University, Shanghai 201306, PR China;2. Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, Shandong 266071, PR China

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    SMART(Switching Mechanism At 5′ end of RNA Transcript)血细胞全长cDNA重组率达插入片段在4.3×109 pfu/mL条平均长度为序列条条条同源比对发现, 2条未知序列。通过同源性比较筛选出多个与生长、代谢、免疫等相关的功能基因可在短期内获得大量脊尾白虾血细胞组织的功能基因表达信息

    Abstract:

    technology. We determined that the titer of the primary cDNA library was 2.8 × 106 pfu/mL, the recombinant efficiencies were over 99%, the insert size of the library was between 400 bp and 2 000 bp, and the tpfu/mL. One hundred single clones were selected randomly to screen for primary detection and a total of 95 high. The ESTs were into 70 unigenes, comprising 11 contigs and 59 singlets. When compared with the public database by Blast, 20 unigenes -value < 1e-5) to knownwere unknown genes (hypothetical protein), and 48 homology to any sequence. Several functional genes of Troponin I, Enolase, Anti-lipopolysaccharide factor and Lysozyme, were identified by homology comparison. The quality of this haemocyte cDNA library is of a high enough standard to obtain haemocyte-specific expression gene information. lts provide important information on functional genes and lay the groundwork for screening of molecular markers in .

    参考文献
    相似文献
    引证文献
引用本文

段亚飞,刘萍,李吉涛,李健,陈萍.脊尾白虾血细胞全长cDNA文库的构建及EST序列分析[J].中国水产科学,2013,20(2):243-249
DUAN Yafei, LIU Ping, LI Jitao, LI Jian, CHEN Ping. Construction of a cDNA library from the haemocytes of Exopalaemon carinicauda and analysis of partial expressed sequence tags[J]. Journal of Fishery Sciences of China,2013,20(2):243-249

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2013-04-03
  • 出版日期:
文章二维码