鱼类传染性造血器官坏死病毒 RT-LAMP 检测方法的建立及应用 
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1. 中国水产科学研究院 黑龙江水产研究所, 黑龙江 哈尔滨 150070; 2. 本溪艾格莫林实业有限公司 辽宁 本溪 117000

作者简介:

刘淼(1987-), 女, 助理研究员, 硕士, 主要从事水产病害研究. E-mail: miao719@hotmail.com

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s941

基金项目:

国家科技支撑计划项目(2012BAD25B10); 中央级公益性科研院所基本科研业务费专项(HSY201204).


Development and application of reverse transcription loop-mediated isothermal amplification for detection of IHNV 
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Affiliation:

1. Heilongjiang Fishery Research Institute Chinese Academy of Fishery Sciences, Harbin 150070, China; 2. Benxi Agrimarine Industries Inc., Benxi of Liaoning Province 117000, China

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    摘要:

    将逆转录环介导的等温扩增技术(reverse transcription loop-mediated isothermal amplification, RT-LAMP)引入 到鱼类的传染性造血器官坏死病病毒(infectious haematopoietic necrosis virus, IHNV)检测中, 建立了简单、快速、 灵敏的 IHNV 检测方法。针对 IHNV 的聚合酶蛋白基因(polymerase protein, L)设计特异性引物, 以 IHNV 基因组 RNA为模板, 在反转录酶和Bst DNA聚合酶的作用下进行RT-LAMP, 反应产物添加SYBR Green I荧光染料后, 肉 眼观察阳性样本表现为荧光绿色, 阴性样本表现为红棕色。2%琼脂糖凝胶电泳检测结果与可视化检测结果一致。 该方法实现了检测结果的可视化。特异性分析显示该方法不与传染性胰脏坏死病毒(infectious pancreatic necrosis virus, IPNV)及病毒性出血性败血症病毒(viral haemorrhagic septicaemia virus, VHSV)发生交叉反应, 并且可检测不 低于 10 pfu 的 IHNV RNA。本研究所建立的 IHNV RT-LAMP 可视化检测方法具有灵敏度高、特异性好、成本低、 不依赖任何专门的仪器设备的优点, 其检测结果直观可视化, 可实现现场高通量快速检测

    Abstract:

    A reverse transcription loop-mediated isothermal amplification (RT-LAMP) method was developed for detection of infectious haematopoietic necrosis virus (IHNV). A set of specific primers were designed based on the IHNV L-protein sequence. IHNV RNA was used as a template for RT-LAMP in a reaction mixture containing reverse transcriptase and Bst DNA polymerase. The RT-LAMP products were observed by the naked eye by adding SYBR Green I fluorescent dye. Positive samples exhibited a fluorescent green color whereas negative samples exhibited a reddish brown color. The RT-LAMP assay had no cross reactivity with infectious pancreatic necrosis virus (IPNV) and viral haemorrhagic septicaemia virus (VHSV). The RT-LAMP assay was highly sensitive, and could detect < 10 pfu IHNV RNA. We confirmed these results using 2% agarose gel electrophoresis. In summary, we developed a sensitive, specific, low cost, and simple RT-LAMP method for rapid field diagnosis of IHNV. The method can achieve high throughput detection, without relying on any special equipment.

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刘淼,徐黎明,卢彤岩,赵景壮,曹永生,刘红柏,尹家胜,张金凤,冯剑.鱼类传染性造血器官坏死病毒 RT-LAMP 检测方法的建立及应用 [J].中国水产科学,2014,21(5):1065-1071
LIU Miao, XU Liming, LU Tongyan, ZHAO Jingzhuang, CAO Yongsheng, LIU Hongbai, YIN Jiasheng, ZHANG Jinfeng, FENG Jian. Development and application of reverse transcription loop-mediated isothermal amplification for detection of IHNV [J]. Journal of Fishery Sciences of China,2014,21(5):1065-1071

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  • 在线发布日期: 2015-08-04
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