鳜味觉受体I型(T1R)家族基因基因组鉴定与表达分析
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薛文博(1999-),男,硕士研究生,研究方向为鱼类遗传育种.E-mail:2657846916@qq.com

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S917

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现代农业产业技术体系专项(CARS-46).


Genomic identification and expression analysis of mandarin fish (Siniperca chuatsi) taste receptor type I (T1R) family genes
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    摘要:

    味觉受体 I 型(taste receptor type I, T1R)家族在对环境营养物质的识别中发挥关键作用。为理解鳜(Siniperca chuatsi)味觉受体 I 型家族成员数目、表达特征与其肉食性之间的关联, 利用基因家族分析从鳜基因组数据中鉴定了 T1R 家族成员基因, 荧光定量 PCR 测定了孵化后 0~30 d (0~30 dph, days post hatching)、驯食饲料后 T1R 家族成员基因表达水平变化。结果显示, 鳜 T1R 家族包括 4 个基因: t1r1、t1r2a1、t1r2a2、t1r3, 4 个基因序列、结构域完整; t1r2 基因出现了复制(t1r2a1、t1r2a2), t1r2a1、t1r2a2 外显子结构一致, 结构域相同, 仅第 3、4、5 内含子和 5ʹ 端 UTR 长度不同。选择压力(dN/dS)分析表明, 鳜 t1r1 正向选择, t1r2s t1r3 负选择, 鲜味受体基因 t1r1 进化压力可能与其独特食性(终生以活饵为食)有关。4 个味觉受体 I 型基因 t1r1、t1r2a1、t1r2a2、t1r3 自开口前开始表达, 20 d 后表达增加, 其中鲜味受体基因 t1r1 表达水平显著高于甜味受体基因 t1r2s; 饲料驯食养殖后, 4 个 t1r 基因表达量下调, 其中鲜味受体基因 t1r1 表达下调最为显著。研究结果为鳜味觉受体基因对其肉食性形成与适应研究提供了基础资料。

    Abstract:

    Taste serves as the foundation for choosing food and is one of the most vital senses of animals. Numerous taste cells, specialized structures that can sense taste, form taste buds. Taste receptors are present in the membranes of these cells. Taste receptors include type I and type II receptors, which are responsible for identifying distinct flavors in food. The taste receptor type I (T1R) family plays a crucial role in the identification of nutrients in the environment. TIR family genes rely on different heterodimers for flavor recognition and can recognize fresh (T1R1+T1R3) and sweet (T1R2+T1R3) flavors. Animal feeding habits are frequently associated with the number and replication of T1R family genes. Mandarin fish (Siniperca chuatsi) have a unique carnivorous lifestyle and eat live bait throughout their lifetimes. To understand the correlation between the quantity and expression patterns of T1R family members in mandarin fish and their carnivorous nature, gene family analysis was conducted to identify T1R family member genes in mandarin fish genomic data. Changes in the T1R family member gene expression levels were then determined using Quantitative Real-time PCR (qPCR) from to 0–30 days post hatching (0–30 dph) and after the domestication of their diet. This study found that the T1R family in mandarin fish comprises four genes, t1r1, t1r2a1, t1r2a2, and t1r3, each of which possesses complete sequences and structural domains. The t1r2 gene was duplicated as t1r2a1 and t1r2a2, and the exons of both displayed identical structural domains. However, the length of the 3rd, 4th, and 5th introns and 5' UTR varied among them. Selection pressure (dN/dS) analysis indicated positive selection for t1r1 in mandarin fish, whereas t1r2s and t1r3 showed negative selection. The possible cause of evolutionary pressure on the umami receptor gene t1r1 might be related to the uncommon diet of this fish species. The expression of four taste receptor type I genes, t1r1, t1r2a1, t1r2a2, and t1r3, began before the oropharyngeal cavity of mandarin fish was completely formed, and increased after 20 d. The umami receptor gene (t1r1) was found to have a much higher expression among these genes than that of the sweet taste receptor gene (t1r2s). All four t1r genes showed lower expression levels after domestication, with t1r1, the umami receptor gene, showed the most significant downregulation. These findings provide fundamental data for investigating the effects of taste receptor genes on the development and adaptation of mandarin fish to carnivores.

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薛文博,姚晓丽,谢金洋,高锦华,赵金良.鳜味觉受体I型(T1R)家族基因基因组鉴定与表达分析[J].中国水产科学,2024,31(2):155-164
XUE Wenbo, YAO Xiaoli, XIE Jinyang, GAO Jinhua, ZHAO Jinliang. Genomic identification and expression analysis of mandarin fish (Siniperca chuatsi) taste receptor type I (T1R) family genes[J]. Journal of Fishery Sciences of China,2024,31(2):155-164

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  • 收稿日期:2023-12-04
  • 最后修改日期:2024-01-12
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  • 在线发布日期: 2024-04-30
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